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BiAlith Links to Tools and Sites

  Select a category:

Tools

Software for imaging, stats, office applications, VRML viewers, etc.

Search

Web and scientific literature search engines, library catalogues, patents, etc.

Reference

Dictionaries, journal impact factors, standard images, image file formats, IP algorithms & tutorials, maps, periodic table, clip art, etc.

Histopathology

Diagnostic histopathology, histotechnology and other medical sites

 

Tools

Pricing

Description

Calculator

Free

An online calculator by Athera, written by Rolf Howarth. Useful when your system administrator has failed to install even the basic Windows calculator on your PC!

LabPlot

Free

Open Source data visualisation, fitting, plotting, etc. Made by KDE

Statistical Packages

Free

This webpage by John C. Pezzullo has links to many free statistical analysis packages

Cortona VRML

Free

VRML  plug-in and player. Alternative to the Cosmo player which is hard to find on the web these days. The Cortona player is free for non-commercial personal / academic use.

GLView

Free

A stand-alone VRML viewer (not a plug-in) by Holger Grahn

Open VRML

Free

A set of open source and GNU VRML tools including a viewer

OpenOffice

Free

Fully functional Office suite from the Apache Software Foundation. Includes Spreadsheet, Slide Presentation package, Word Processor, Drawing package, Database, etc. High degree of compatibility with Microsoft Office - but free of charge. Versions for PC, Mac and Unix are available.

FIJI

Free

An alternative packaging of the Image J software bundled with some useful plugins, etc.

NIH Image / ImageJ

Free

Image processing program with many plug-ins. Cross-platform and Java-based.

Computer vision

Various

Links to computer vision-related algorithms, information and software packages. From Carnegie Mellon School of Computer Sciences, USA.

IrfanView

Free

This is a very useful program for doing batch conversions or simple batch processing such as re-sizing. I often use it to convert JPEG or TIFF images from scanners and cameras into BMP files as the current version of BiaQIm cannot read JPEG or TIFF images.

PBMPlus

Free

Jeff Poskanzer's original image processing toolkit. Although this original version was designed for Unix systems the distribution contains the source code and a PC version is available via the Graphics Programs and Utilities site link given below. From the MathSource website.

MRIcro

Free

Image processing geared around MRI images with 3D support. From Chris Rorden's neuropsychology lab. For Windows 9x/NT, Linux and Solaris.

Etdips

Free

3-D and 2-D image processing and visualisation suite geared to radiology but also accepting ordinary tiff and bmp image stacks. Originally from the NIH Clinical Centre, USA. For Windows 2000/9x/NT. (This link takes you to the Sourceforge.net download site as the original NASA site no longer exists).

3D Slicer

Free

Cross platoform open source 3D visualisation and analysis for (e.g.) CT and MRI data but can be used with other 3D data as well.

CFITSIO

Free

A tool for C programmers to enable them to read, write and process FITS formatted images. From NASA HEASARC. I used the cfitsio library in BiaQIm and the Biaram programs.

ImagingSource

Commercial

A source of affordable frame grabbers and cameras for scientists / industry.

NetTools

Free

A source of network software scripts

 

Search

Description

Yahoo, Google,

General purpose search engines.

Google Scholar

The academic version of Google - search the scientific literature

Medline, etc.

The National Library of Medicine (USA) PubMed service

British Library

Access the catalogues of the british library

RSM Library

Access the Royal Society of Medicine's library catalogue

CiteSeer

Search for scientific papers. Good for image analysis related topics (esp. high level and theoretical basis). Run by NEC.

SPIE Web

Search for SPIE conference proceedings and papers.

IEEE Explore

Search for IEEE conference proceedings and papers.

UK Intellectual property office

UK Patent and Trade Mark database (Now called the Intellectual Property Office)

US Patent Office

US Patent and Trade Mark database

Canada Patent Office

Search the Canadian Patent & trade mark database

 

Reference

Description

Impact Factors

Journal Citation Reports from the ISI Web of Knowledge UK. Athens password or IP verification required

Dictionaries

English1, English2, Mathemtatics, Medical, Acronym, Eponyms

English1) is from Cambridge University Press, English2) Dictionary & Roget's Thesaurus from the IAC Corporation, Welsh) is from BBC Wales, Mathematics) is a dictionary of mathematics by Eric Weisstein of Wolfram Research Medical) is a Medical Dictionary by Medic8 Ltd, UK. Acronym) is an American site with an acronym search engine from mountain data systems (has ads and popups). Eponyms) lets you look up medical eponymous terms/syndromes

Translator

Free online language translator by Google

Gray's Anatomy

Online Gray's Anatomy by Bartleby.com

Imaging Resource

A good site to find reviews, samples and spec.s on digital cameras, scanners, etc.

File Formats

Details of many image file formats. From the University of Edinburgh Computer Science dept. UK.

Medical Imaging Research at ISI

Medical (radiology) imaging research and demos at the Imaging Sciences Institute of of Utrecht University (Netherlands). Information on multimodal registration, 3D visualisation, etc. with aplications.

TestImages

This web page makes available standard images for download which are commonly used in the image processing literature for demonstration of new methods (from the Carnegie Mellon School of Computer Sciences, USA).

Periodic Table

Online periodic table of elements from the Royal Society of Chemistry

TheBigProject

Free calendars and lots more from The Big Project UK.

Weather

from The UK Met Office

GMT

GMT standard time online + software to sync your PC's time to atomic clock standards

 

Histopathology

Description

Path Book

Website of a great textbook of pathology with many links to useful websites.

 

 Copyright Copyright Dr P. J. Tadrous 2000-2024

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